Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923990.1_cds_XP_016472444.1_64678
CDS Infomation

[gene=LOC107794472] [db_xref=GeneID:107794472] [protein=LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like] [exception=unclassified translation discrepancy] [protein_id=XP_016472444.1] [location=complement(join(23187..23385,23940..24157,24412..24490,24567..24694,24793..24957,25376..25480,30809..30928,34730..34828,34927..34943,34946..35021,35800..35913,36053..36160,36896..36960,37379..37558,37902..38528,39375..39422,39505..39730))] [gbkey=CDS]
Sequence

ATGCCAGCTTCCAAATCCAAAACCCTAAGCTCTTTGTTCCGCTCCGCCAGTAAGATATCA
AAGCAATGGAAATCCGCTGCGCCTTCTACCTCGGCTGAGGATATTGCCCTAAAACAGTAC
GTCGCCTCCATTAAATCGCCATCTTCATCTCGGCTTACTGATTCTTCCAAGTCTCTCAGT
GAAATAGCCGCCGAAAGCCTGAATTTTAAGTCAGCTGCTGATTCTGGAGAATCAGCGAAA
GTGCTATCAGGAGAAATATCGTCGATACTATGTGGTGATTTAGATTATGATTTGATCGAT
TCAGAAGCGAGTAGCAACACAAGTTGTTTGGAAAATGTATTGGATGTACCATGGTTATCA
AATATAGATAGATCCAATAAGTCATTGCGGCGGAAAGAAATAGCACGAGAAAGGAAGGAA
ATATGGACCTTCAAGAGTAGTCAGACAAGTCGTTTCCACCAGTTGGTTAAACAATGTGCC
TGTAAATTGGGGACTGATACTACCATTAAAGTGTTTGGTAAATTGGGACGAGAAACTGGC
CTGAAAGAATATAATGCTCTAATAAGACTCTGTATAGAGAAAGCCAGAGAAACAAATGAT
GAAGAGGTGTCGTTGAAGCAGCTTTCAAAAGCTTATCAACTTCTTAAATCAATGAAGGAA
CAGGGTTTCCAAGTAGAAGAGGAGAGCTATGGTCCAATTCTTATGTTTTTTGTTGATTTT
GGCATGGCACAGGAGTTTGACTTTTACTGTGAGCTCATAATAGATAGAAACTCTGATTCA
CTTGCAAGATTAGCTTACTATGAGATGTTGCTTTGGATTAAAGTTGAGAATGAAGATAAA
CTAGAAGAACTCTTCTATCATCTTTCACTTTATGATGGCGACGATAAATCCTCCTTTCAA
GAAAACTATCTGTTAGCACTGTGTGAAGAGGACCGTGTTAAGAATTTTGTGAGGCTCCTA
CACACTGTTGATATAACAAAAATTTCATCTATGAATTGTGTCACAAATATCTTCAAGTTC
TTGGGGAAGTTGCAACTGGAGTCCTTCGCAAAGAAGTTTCTTCAGGAGTTAGTAACAATA
GATATTGGAGCAGAAAACATCTCAAAGTTCATTTACAATTATACAACTAGCATGCCAAAT
TTTGCGCTTGAAGATGTGATGCTTGAATTCAAAAATTTACATGCTGAGCTGGAGCTTACA
CCAACATCTTCCCAATATCAGAAGCTTATTATGTATTGTTGTGAGTTATTTAAGGTACAT
GTTGCACTTGATATGGTTGATCAGATGTTTGAAGCGGGTGTGACGTTAACGCTGGAGACA
TTTAATTCCATACTAGATGCCTGCGATAAAGGCTGTGAGTATAATTTGGTTCATCGAATA
TATTCAATGTTACTTCGCCATGGTCTCAAGCCAGATAGCGAGACCTTCAGGATAATGATA
AATAACGTGAGAGCAAAAGATTTTGAAGGCGCATATGGCATGATCGAAGATTTGAAGAAA
TTTGACGTGATGCCTACCACTAGCATGTACAATTGCATAATGGCAGGATATTTCCGGGAG
AAAGACATTCATGCTGCACTAAAGGTTCTCAAACAAATGGAAGATGCTAATGTGAAGTCA
GACTCTCAGACTTTCAGCTATCTGATAAGCAATTGCACAAGTGGAGATAACATATCTAAG
TTTCTTGATGAGATGAAAGATTCTGGAGTTCAATACACAAAGCATGTATATATGGCCCTA
ATAAATGGATATACAGCTTCTGGACAGTTTGAAGAGGCTAAACAGGTAATCTATGATCGA
AGAGTACCTGTAAAGAGCTTCAATGAAATCAGAAGTGTGCTTATTTCAGCTCTTGCATCA
CATGGACAAATGCTTGATGCCCTTGAAATATATGAAGAAATGAATAAAGCTCAATGCAAG
TTGGAGCCAAAAACAATCATATGTCTCATTGAACACCTTCAGTCTGAAGGAGAGTTGCAT
AGATTGCTGCACTTACTTGAGCAACTAGATGGCCTGGATCGTTGGATTGATGCTTGCTTT
AGGGTCATAACATATTGTATTCGGCACAATCACTTGAGATCTGCTGTTGACTTGCTCAAA
AAGCTGGTAGATGCATACAAGAACGATGAAGTGGCTAAAGAAGTTCTGTTTGATGAGGTT
TTCTGCCAGATTGCGATAAATGAACCAACAAATTTGCAGTTCGGCTTGGATCTCCTTCAG
GCTATTAAGAAAGAGATTGGTGTCCGCCTTTCAAGAAAAAGTCTTGATTTCCTCCTCAGT
GCGTGTGTCAATGGCAAGGATTTACAAGCTTGTTCTCTGGTTTGGAAAGAATACAGAACA
GCTAGTCTTCCTTACAATGTTTTAAGTTTTGTGAGGATGTATCAAGCCTTGTTGGCATTA
GGGGACTACAAATCTGCAGCAAATATTTTCAATAAAATACCAAAGGATGATATTCACGTT
TGCAGTGTACTCCAAGCTTGTCAAGAAACTTATGGAAAATCTGTCTCTGCAAAGGGGAAA
AAGAAGAAAAAGAAAATAGGAAAGAATGTGAGATGTGAACAGTGGAGTTCATAG

Peptide Sequence

PEP ID

XP_016472444.1
PEP Infomation

PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like [Nicotiana tabacum]
Sequence

MPASKSKTLSSLFRSASKISKQWKSAAPSTSAEDIALKQYVASIKSPSSSRLTDSSKSLS
EIAAESLNFKSAADSGESAKVLSGEISSILCGDLDYDLIDSEASSNTSCLENVLDVPWLS
NIDRSNKSLRRKEIARERKEIWTFKSSQTSRFHQLVKQCACKLGTDTTIKVFGKLGRETG
LKEYNALIRLCIEKARETNDEEVSLKQLSKAYQLLKSMKEQGFQVEEESYGPILMFFVDF
GMAQEFDFYCELIIDRNSDSLARLAYYEMLLWIKVENEDKLEELFYHLSLYDGDDKSSFQ
ENYLLALCEEDRVKNFVRLLHTVDITKISSMNCVTNIFKFLGKLQLESFAKKFLQELVTI
DIGAENISKFIYNYTTSMPNFALEDVMLEFKNLHAELELTPTSSQYQKLIMYCCELFKVH
VALDMVDQMFEAGVTLTLETFNSILDACDKGCEYNLVHRIYSMLLRHGLKPDSETFRIMI
NMXVRAKDFEGAYGMIEDLKKFDVMPTTSMYNCIMAGYFREKDIHAALKVLKQMEDANVK
SDSQTFSYLISNCTSGDNISKFLDEMKDSGVQYTKHVYMALINGYTASGQFEEAKQVIYD
RRVPVKSFNEIRSVLISALASHGQMLDALEIYEEMNKAQCKLEPKTIICLIEHLQSEGEL
HRLLHLLEQLDGLDRWIDACFRVITYCIRHNHLRSAVDLLKKLVDAYKNDEVAKEVLFDE
VFCQIAINEPTNLQFGLDLLQAIKKEIGVRLSRKSLDFLLSACVNGKDLQACSLVWKEYR
TASLPYNVLSFVRMYQALLALGDYKSAANIFNKIPKDDIHVCSVLQACQETYGKSVSAKG
KKKKKKIGKNVRCEQWSS

Transcript Sequence

Gene sequence data has not been registered.